Stem-loop abu-mir-10562

Accession

MI0034005

Description

Astatotilapia burtoni abu-mir-10562 precursor miRNA

Sequence

caugcucagugguuaacgacuugucaaucgccagUCAUCAGCCAGUGAGCGUGUGG
((((((((.(((((...((((.((.....)).))))...))))).))))))))...

Structure

---        g     aac    u  c 
   caugcuca ugguu   gacu gu a
   |||||||| |||||   |||| || a
   GUGCGAGU ACCGA   CUga cg u
GGU        G     CUA    c  c 

Annotation confidence Not enough data

Genome context

JH425631.1: 495963-496018 [-]

Mature abu-miR-10562

• Accession: MIMAT0042270
• Description: Astatotilapia burtoni abu-miR-10562 mature miRNA
• Sequence: 35 - UCAUCAGCCAGUGAGCGUGUGG - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381