Stem-loop mze-mir-10a

Accession

MI0034011

Description

Metriaclima zebra mze-mir-10a precursor miRNA

Sequence

1388611 reads, 77359.0 reads per million, 7 experiments

UACCCUGUAGAACCGAAUUUGUgugaugaaaccagauucaCAGAUUCGAUUCUAGGGGAGU
...(((.(((((.((((((((((...((....))....)))))))))).))))).)))...

Structure

UAC   G     C          -uga  a 
   CCU UAGAA CGAAUUUGUg    ug a
   ||| ||||| ||||||||||    ||  
   GGG AUCUU GCUUAGACac    ac a
UGA   G     A          uuag  c 

Annotation confidence High

Genome context

AGTA03000134.1: 2230611-2230671 [-]

Mature mze-miR-10a-5p

• Accession: MIMAT0042276
• Description: Metriaclima zebra mze-miR-10a-5p mature miRNA
• Sequence: 1 - UACCCUGUAGAACCGAAUUUGU - 22
• Evidence: experimental ; Illumina [1]

Mature mze-miR-10a-3p

• Accession: MIMAT0059890
• Description: Metriaclima zebra mze-miR-10a-3p mature miRNA
• Sequence: 41 - CAGAUUCGAUUCUAGGGGAGU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381