Stem-loop mze-mir-21-1

Accession

MI0034018

Description

Metriaclima zebra mze-mir-21-1 precursor miRNA

Sequence

2336850 reads, 75024.0 reads per million, 7 experiments

UAGCUUAUCAGACUGGUGUUGGCuguuggaugugcuuggCAACAGCGGUCUGUAAGCUGGC
(((((((.(((((((.(((((.(.((.......))..).))))).))))))))))))))..

Structure

--       U       G     G -u  ug 
  UAGCUUA CAGACUG UGUUG C  gu  g
  ||||||| ||||||| ||||| |  ||  a
  GUCGAAU GUCUGGC ACAAC g  cg  u
CG       -       G     g uu  ug 

Annotation confidence High

Genome context

AGTA03000100.1: 3221138-3221198 [-]

Mature mze-miR-21-5p

• Accession: MIMAT0042282
• Description: Metriaclima zebra mze-miR-21-5p mature miRNA
• Sequence: 1 - UAGCUUAUCAGACUGGUGUUGGC - 23
• Evidence: experimental ; Illumina [1]

Mature mze-miR-21-1-3p

• Accession: MIMAT0059896
• Description: Metriaclima zebra mze-miR-21-1-3p mature miRNA
• Sequence: 40 - CAACAGCGGUCUGUAAGCUGGC - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381