Stem-loop mze-mir-21-2

Accession

MI0034019

Description

Metriaclima zebra mze-mir-21-2 precursor miRNA

Sequence

2336228 reads, 74987.0 reads per million, 7 experiments

UAGCUUAUCAGACUGGUGUUGGCuguuaagauugcaaggCGACAACAGUCUGUAGGCUGUc
(((((((.(((((((.(((((.((((.......)).)).))))).))))))))))))))..

Structure

--       U       G     G  -  ua 
  UAGCUUA CAGACUG UGUUG Cu gu  a
  ||||||| ||||||| ||||| || ||  g
  GUCGGAU GUCUGAC ACAGC ga cg  a
cU       -       A     g  a  uu 

Annotation confidence High

Genome context

AGTA03000089.1: 801583-801643 [+]

Mature mze-miR-21-5p

• Accession: MIMAT0042282
• Description: Metriaclima zebra mze-miR-21-5p mature miRNA
• Sequence: 1 - UAGCUUAUCAGACUGGUGUUGGC - 23
• Evidence: experimental ; Illumina [1]

Mature mze-miR-21-2-3p

• Accession: MIMAT0059897
• Description: Metriaclima zebra mze-miR-21-2-3p mature miRNA
• Sequence: 40 - CGACAACAGUCUGUAGGCUGU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381