Stem-loop mze-mir-92a-1

Accession

MI0034020

Description

Metriaclima zebra mze-mir-92a-1 precursor miRNA

Sequence

5182841 reads, 184537.0 reads per million, 7 experiments

AGGUUGGGAGAGGUGGCAAUGCUcugugcuuguguggUAUUGCACUUGUCCCGGCCUGU
(((((((((.(((((.(((((((....((....)))))))))))))).)))))))))..

Structure

--         G     G       cugu  u 
  AGGUUGGGA AGGUG CAAUGCU    gc u
  ||||||||| ||||| |||||||    ||  
  UCCGGCCCU UUCAC GUUAUgg    ug g
UG         G     -       ----  u 

Annotation confidence High

Genome context

AGTA03000134.1: 1276024-1276082 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from mze-mir-92a-1

Mature mze-miR-92a-1-5p

• Accession: MIMAT0059898
• Description: Metriaclima zebra mze-miR-92a-1-5p mature miRNA
• Sequence: 1 - AGGUUGGGAGAGGUGGCAAUGCU - 23
• Evidence: experimental ; Illumina [1]

Mature mze-miR-92a-3p

• Accession: MIMAT0042283
• Description: Metriaclima zebra mze-miR-92a-3p mature miRNA
• Sequence: 38 - UAUUGCACUUGUCCCGGCCUGU - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381