Stem-loop mze-mir-184a

Accession

MI0034024

Description

Metriaclima zebra mze-mir-184a precursor miRNA

Sequence

1482153 reads, 50713.0 reads per million, 7 experiments

UUAUCACUUUUCCAGCCCAGCuauagauucuguauccguUGGACGGAGAACUGAUAAGGGC
((((((.((((((.(.((((((((((...)))))...))))).))))))).))))))....

Structure

----      C      A C     ---     a 
    UUAUCA UUUUCC G CCAGC   uauag  
    |||||| |||||| | |||||   ||||| u
    AAUAGU AAGAGG C GGUug   auguc  
CGGG      C      - A     ccu     u 

Annotation confidence High

Genome context

AGTA03000001.1: 5365445-5365505 [+]

Mature mze-miR-184a-5p

• Accession: MIMAT0059903
• Description: Metriaclima zebra mze-miR-184a-5p mature miRNA
• Sequence: 1 - UUAUCACUUUUCCAGCCCAGC - 21
• Evidence: experimental ; Illumina [1]

Mature mze-miR-184a-3p

• Accession: MIMAT0042285
• Description: Metriaclima zebra mze-miR-184a-3p mature miRNA
• Sequence: 40 - UGGACGGAGAACUGAUAAGGGC - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381