Stem-loop mze-mir-146

Accession

MI0034025

Description

Metriaclima zebra mze-mir-146 precursor miRNA

Sequence

84052 reads, 4561.0 reads per million, 7 experiments

UGAGAACUGAAUUCCAUAGAUGGugacaucuucaggugucAUCUAUGGGCUCAGUUCUUUUGg
.(((((((((..((((((((...(((((((....))))))))))))))).)))))))))....

Structure

---U         AU        UGG       u 
    GAGAACUGA  UCCAUAGA   ugacauc u
    |||||||||  ||||||||   |||||||  
    UUCUUGACU  GGGUAUCU   Acugugg c
gGUU         -C        ---       a 

Annotation confidence High

Genome context

AGTA03000137.1: 890156-890218 [-]

Mature mze-miR-146-5p

• Accession: MIMAT0042286
• Description: Metriaclima zebra mze-miR-146-5p mature miRNA
• Sequence: 1 - UGAGAACUGAAUUCCAUAGAUGG - 23
• Evidence: experimental ; Illumina [1]

Mature mze-miR-146-3p

• Accession: MIMAT0059904
• Description: Metriaclima zebra mze-miR-146-3p mature miRNA
• Sequence: 41 - AUCUAUGGGCUCAGUUCUUUUG - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381