Stem-loop mze-mir-9-3

Accession

MI0034026

Description

Metriaclima zebra mze-mir-9-3 precursor miRNA

Sequence

2899683 reads, 92803.0 reads per million, 7 experiments

UCUUUGGUUAUCUAGCUGUAUGAgugauguacauucuucAUAAAGCUAGAUAACCGAAAGu
..(((((((((((((((.((((((.((.......)))))))).)))))))))))))))...

Structure

-UC               G      u  ug 
   UUUGGUUAUCUAGCU UAUGAg ga  u
   ||||||||||||||| |||||| ||  a
   AAGCCAAUAGAUCGA AUAcuu cu  c
uGA               A      -  ua 

Annotation confidence High

Genome context

AGTA03000156.1: 322805-322865 [-]

Mature mze-miR-9-5p

• Accession: MIMAT0042284
• Description: Metriaclima zebra mze-miR-9-5p mature miRNA
• Sequence: 1 - UCUUUGGUUAUCUAGCUGUAUGA - 23
• Evidence: experimental ; Illumina [1]

Mature mze-miR-9-3p

• Accession: MIMAT0059902
• Description: Metriaclima zebra mze-miR-9-3p mature miRNA
• Sequence: 40 - AUAAAGCUAGAUAACCGAAAG - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381