Stem-loop mze-mir-9-6

Accession

MI0034029

Description

Metriaclima zebra mze-mir-9-6 precursor miRNA

Sequence

2899667 reads, 92802.0 reads per million, 7 experiments

UCUUUGGUUAUCUAGCUGUAUGAguguuaaauaccugucAUAAAGCUAGAUAACCGAAAGu
..(((((((((((((((.(((((((((...))))...))))).)))))))))))))))...

Structure

-UC               G     ---    u 
   UUUGGUUAUCUAGCU UAUGA   gugu  
   ||||||||||||||| |||||   |||| a
   AAGCCAAUAGAUCGA AUAcu   caua  
uGA               A     guc    a 

Annotation confidence High

Genome context

AGTA03000170.1: 690015-690075 [+]

Mature mze-miR-9-5p

• Accession: MIMAT0042284
• Description: Metriaclima zebra mze-miR-9-5p mature miRNA
• Sequence: 1 - UCUUUGGUUAUCUAGCUGUAUGA - 23
• Evidence: experimental ; Illumina [1]

Mature mze-miR-9-3p

• Accession: MIMAT0059902
• Description: Metriaclima zebra mze-miR-9-3p mature miRNA
• Sequence: 40 - AUAAAGCUAGAUAACCGAAAG - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381