Stem-loop mze-mir-199-2

Accession

MI0034030

Description

Metriaclima zebra mze-mir-199-2 precursor miRNA

Sequence

cccaguguucagacuaccuguucauugucauacugguguACAGUAGUCUGCACAUUGGUU
.(((((((.((((((((.(((.((((........)))).))))))))))).)))))))..

Structure

-c       u        c   u    guc 
  ccagugu cagacuac ugu cauu   a
  ||||||| |||||||| ||| ||||    
  GGUUACA GUCUGAUG ACA gugg   u
UU       C        -   u    uca 

Annotation confidence Not enough data

Genome context

AGTA03000234.1: 1309539-1309598 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from mze-mir-199-2

Mature mze-miR-199

• Accession: MIMAT0042287
• Description: Metriaclima zebra mze-miR-199 mature miRNA
• Sequence: 40 - ACAGUAGUCUGCACAUUGGUU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381