Stem-loop mze-mir-199-3

Accession

MI0034032

Description

Metriaclima zebra mze-mir-199-3 precursor miRNA

Sequence

1332632 reads, 43227.0 reads per million, 7 experiments

CCCAGUGUUCAGACUACCUGUUCAGgaaguagugguuguACAGUAGUCUGCACAUUGGUU
.(((((((.((((((((.(((.(((..........))).))))))))))).)))))))..

Structure

-C       U        C   U   gaag 
  CCAGUGU CAGACUAC UGU CAG    u
  ||||||| |||||||| ||| |||     
  GGUUACA GUCUGAUG ACA guu    a
UU       C        -   u   ggug 

Annotation confidence High

Genome context

AGTA03000002.1: 9987795-9987854 [-]

Mature mze-miR-199-5p

• Accession: MIMAT0059905
• Description: Metriaclima zebra mze-miR-199-5p mature miRNA
• Sequence: 1 - CCCAGUGUUCAGACUACCUGUUCAG - 25
• Evidence: experimental ; Illumina [1]

Mature mze-miR-199-3p

• Accession: MIMAT0042287
• Description: Metriaclima zebra mze-miR-199-3p mature miRNA
• Sequence: 40 - ACAGUAGUCUGCACAUUGGUU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381