Stem-loop mze-mir-199-4

Accession

MI0034038

Description

Metriaclima zebra mze-mir-199-4 precursor miRNA

Sequence

703623 reads, 22721.0 reads per million, 7 experiments

CCCAGUGUUCAGACUACCUGUUCAucaggcugcagcugaACAGUAGUCUGCACAUUGGUU
.(((((((.((((((((.((((((.(........).)))))))))))))).)))))))..

Structure

-C       U        C      u agg 
  CCAGUGU CAGACUAC UGUUCA c   c
  ||||||| |||||||| |||||| |    
  GGUUACA GUCUGAUG ACAagu g   u
UU       C        -      c acg 

Annotation confidence High

Genome context

AGTA03000130.1: 510287-510346 [+]

Mature mze-miR-199-5p

• Accession: MIMAT0059905
• Description: Metriaclima zebra mze-miR-199-5p mature miRNA
• Sequence: 1 - CCCAGUGUUCAGACUACCUGUUCA - 24
• Evidence: experimental ; Illumina [1]

Mature mze-miR-199-3p

• Accession: MIMAT0042287
• Description: Metriaclima zebra mze-miR-199-3p mature miRNA
• Sequence: 40 - ACAGUAGUCUGCACAUUGGUU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381