Stem-loop mze-mir-140

Accession

MI0034050

Description

Metriaclima zebra mze-mir-140 precursor miRNA

Sequence

81913 reads, 3730.0 reads per million, 7 experiments

CAGUGGUUUUACCCUAUGGUAGgugacaucaugcuguucuACCACAGGGUAGAACCACGGAC
..(((((((((((((.((((((..((((......)))))))))).)))))))))))))....

Structure

--CA             A      gu    uc 
    GUGGUUUUACCCU UGGUAG  gaca  a
    ||||||||||||| ||||||  ||||   
    CACCAAGAUGGGA ACCAuc  uugu  u
CAGG             C      --    cg 

Annotation confidence High

Genome context

AGTA03000150.1: 518349-518410 [-]

Mature mze-miR-140-5p

• Accession: MIMAT0059923
• Description: Metriaclima zebra mze-miR-140-5p mature miRNA
• Sequence: 1 - CAGUGGUUUUACCCUAUGGUAG - 22
• Evidence: experimental ; Illumina [1]

Mature mze-miR-140-3p

• Accession: MIMAT0042294
• Description: Metriaclima zebra mze-miR-140-3p mature miRNA
• Sequence: 41 - ACCACAGGGUAGAACCACGGAC - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381