Stem-loop mze-mir-205-1

Accession

MI0034053

Description

Metriaclima zebra mze-mir-205-1 precursor miRNA

Sequence

269930 reads, 10355.0 reads per million, 7 experiments

UCCUUCAUUCCACCGGAGUCUGuguaaagugcuaaucaGAUUUCAGUGGUUUGAAGAGUA
..(((((..((((.((((((((..((......))..)))))))).))))..)))))....

Structure

--UC     UU    C        ug  aa 
    CUUCA  CCAC GGAGUCUG  ua  g
    |||||  |||| ||||||||  ||   
    GAAGU  GGUG CUUUAGac  au  u
AUGA     UU    A        ua  cg 

Annotation confidence High

Genome context

AGTA03000042.1: 5285775-5285834 [+]

Mature mze-miR-205-5p

• Accession: MIMAT0042296
• Description: Metriaclima zebra mze-miR-205-5p mature miRNA
• Sequence: 1 - UCCUUCAUUCCACCGGAGUCUG - 22
• Evidence: experimental ; Illumina [1]

Mature mze-miR-205-1-3p

• Accession: MIMAT0059925
• Description: Metriaclima zebra mze-miR-205-1-3p mature miRNA
• Sequence: 39 - GAUUUCAGUGGUUUGAAGAGUA - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381