Stem-loop mze-mir-203-1

Accession

MI0034054

Description

Metriaclima zebra mze-mir-203-1 precursor miRNA

Sequence

70868 reads, 3249.0 reads per million, 7 experiments

AGUGGUUCUCAACAGUUCAACAguucuuuaacaaaauuGUGAAAUGUUUAGGACCACUUG
(((((((((.((((.((((.(((((.........))))))))).)))).)))))))))..

Structure

--         C    G    A     cuu 
  AGUGGUUCU AACA UUCA CAguu   u
  ||||||||| |||| |||| |||||   a
  UCACCAGGA UUGU AAGU Guuaa   a
GU         U    A    -     aac 

Annotation confidence High

Genome context

AGTA03000195.1: 971880-971939 [-]

Mature mze-miR-203-1-5p

• Accession: MIMAT0059927
• Description: Metriaclima zebra mze-miR-203-1-5p mature miRNA
• Sequence: 1 - AGUGGUUCUCAACAGUUCAACA - 22
• Evidence: experimental ; Illumina [1]

Mature mze-miR-203-3p

• Accession: MIMAT0042297
• Description: Metriaclima zebra mze-miR-203-3p mature miRNA
• Sequence: 39 - GUGAAAUGUUUAGGACCACUUG - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381