Stem-loop mze-mir-133a-2

Accession

MI0034056

Description

Metriaclima zebra mze-mir-133a-2 precursor miRNA

Sequence

24922 reads, 1895.0 reads per million, 7 experiments

AGCUGGUAAAAUGGAACCAAAUcaacuguucaauggauUUGGUCCCCUUCAACCAGCUGU
(((((((..((.((.((((((((............)))))))).)).))..)))))))..

Structure

--       AA  U  A        aacug 
  AGCUGGU  AA GG ACCAAAUc     u
  |||||||  || || ||||||||      
  UCGACCA  UU CC UGGUUuag     u
UG       AC  C  C        guaac 

Annotation confidence High

Genome context

AGTA03000146.1: 238714-238773 [+]

Mature mze-miR-133a-5p

• Accession: MIMAT0059929
• Description: Metriaclima zebra mze-miR-133a-5p mature miRNA
• Sequence: 1 - AGCUGGUAAAAUGGAACCAAAU - 22
• Evidence: experimental ; Illumina [1]

Mature mze-miR-133a-3p

• Accession: MIMAT0042298
• Description: Metriaclima zebra mze-miR-133a-3p mature miRNA
• Sequence: 39 - UUGGUCCCCUUCAACCAGCUGU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381