Stem-loop mze-mir-125a-2

Accession

MI0034073

Description

Metriaclima zebra mze-mir-125a-2 precursor miRNA

Sequence

585830 reads, 19452.0 reads per million, 7 experiments

UCCCUGAGACCCUUAACCUGUGAggucaaagcaggucACAGGUGAGGUCCUCGGGAAC
..((((((..(((((.(((((((............))))))))))))..))))))...

Structure

-UC      AC     A       gguca 
   CCUGAG  CCUUA CCUGUGA     a
   ||||||  ||||| |||||||      
   GGGCUC  GGAGU GGACAcu     a
CAA      CU     -       ggacg 

Annotation confidence High

Genome context

AGTA03000111.1: 77276-77333 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from mze-mir-125a-2

Mature mze-miR-125a-5p

• Accession: MIMAT0042310
• Description: Metriaclima zebra mze-miR-125a-5p mature miRNA
• Sequence: 1 - UCCCUGAGACCCUUAACCUGUGA - 23
• Evidence: experimental ; Illumina [1]

Mature mze-miR-125a-2-3p

• Accession: MIMAT0059943
• Description: Metriaclima zebra mze-miR-125a-2-3p mature miRNA
• Sequence: 38 - ACAGGUGAGGUCCUCGGGAAC - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381