Stem-loop mze-let-7i-1

Accession

MI0034075

Description

Metriaclima zebra mze-let-7i-1 precursor miRNA

Sequence

115101 reads, 4133.0 reads per million, 7 experiments

UGAGGUAGUAGUUUGUGCUGUUgguuggguugagacacugcccgcuauggagaugaCUGCGCAAGCUACUGCCUUGCU
.(((((((((((((((((.((((((.((((.........)))))))........))).)))))))))))))))))...

Structure

--U                 U   --------   u    uga 
   GAGGUAGUAGUUUGUGC GUU        ggu gggu   g
   ||||||||||||||||| |||        ||| ||||   a
   UUCCGUCAUCGAACGCG Cag        ucg cccg   c
UCG                 U   uagaggua   -    uca 

Annotation confidence Not enough data

Genome context

AGTA03000103.1: 166534-166611 [-]

Mature mze-let-7i-5p

• Accession: MIMAT0042312
• Description: Metriaclima zebra mze-let-7i-5p mature miRNA
• Sequence: 1 - UGAGGUAGUAGUUUGUGCUGUU - 22
• Evidence: experimental ; Illumina [1]

Mature mze-let-7i-1-3p

• Accession: MIMAT0059946
• Description: Metriaclima zebra mze-let-7i-1-3p mature miRNA
• Sequence: 57 - CUGCGCAAGCUACUGCCUUGCU - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381