Stem-loop mze-mir-455-1

Accession

MI0034077

Description

Metriaclima zebra mze-mir-455-1 precursor miRNA

Sequence

14299 reads, 590.0 reads per million, 7 experiments

UAUGUGCCCUUGGACUACAUCGuggaagccagcaccaUGCAGUCCAUGGGCAUAUACAC
(((((((((.((((((.(((.(((........))).))).)))))).)))))))))...

Structure

---         U      A   C   gaa 
   UAUGUGCCC UGGACU CAU Gug   g
   ||||||||| |||||| ||| |||    
   AUAUACGGG ACCUGA GUa cac   c
CAC         U      C   c   gac 

Annotation confidence High

Genome context

AGTA03000045.1: 3006077-3006135 [+]

Mature mze-miR-455-1-5p

• Accession: MIMAT0042313
• Description: Metriaclima zebra mze-miR-455-1-5p mature miRNA
• Sequence: 1 - UAUGUGCCCUUGGACUACAUCG - 22
• Evidence: experimental ; Illumina [1]

Mature mze-miR-455-1-3p

• Accession: MIMAT0059947
• Description: Metriaclima zebra mze-miR-455-1-3p mature miRNA
• Sequence: 38 - UGCAGUCCAUGGGCAUAUACAC - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381