Stem-loop mze-mir-153a-2

Accession

MI0034080

Description

Metriaclima zebra mze-mir-153a-2 precursor miRNA

Sequence

2960 reads, 297.0 reads per million, 7 experiments

UCAUUUUUGUGAUGUUGCAGCUaguaauaugagcccagUUGCAUAGUCACAAAAGUGAUC
(((((((((((((..(((((((.((.......))..)))))))..)))))))))))))..

Structure

--             GU       -a  aa 
  UCAUUUUUGUGAU  UGCAGCU  gu  u
  |||||||||||||  |||||||  ||  a
  AGUGAAAACACUG  ACGUUga  cg  u
CU             AU       cc  ag 

Annotation confidence High

Genome context

AGTA03000052.1: 7699692-7699751 [-]

Mature mze-miR-153a-5p

• Accession: MIMAT0059949
• Description: Metriaclima zebra mze-miR-153a-5p mature miRNA
• Sequence: 1 - UCAUUUUUGUGAUGUUGCAGCU - 22
• Evidence: experimental ; Illumina [1]

Mature mze-miR-153a-3p

• Accession: MIMAT0042315
• Description: Metriaclima zebra mze-miR-153a-3p mature miRNA
• Sequence: 39 - UUGCAUAGUCACAAAAGUGAUC - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381