Stem-loop mze-mir-135a

Accession

MI0034089

Description

Metriaclima zebra mze-mir-135a precursor miRNA

Sequence

12777 reads, 749.0 reads per million, 7 experiments

UAUGGCUUUUUAUUCCUAUCUGacuguacuuaugguucAUAUAGGGAUGGAAGCCAUGCA
((((((((((.((((((((.(((((((....)))).))).))))))))))))))))))..

Structure

--          U        C   -    a 
  UAUGGCUUUU AUUCCUAU UGa cugu c
  |||||||||| |||||||| ||| ||||  
  GUACCGAAGG UAGGGAUA Acu ggua u
AC          -        U   u    u 

Annotation confidence High

Genome context

AGTA03000067.1: 728800-728859 [+]

Mature mze-miR-135a-5p

• Accession: MIMAT0042322
• Description: Metriaclima zebra mze-miR-135a-5p mature miRNA
• Sequence: 1 - UAUGGCUUUUUAUUCCUAUCUG - 22
• Evidence: experimental ; Illumina [1]

Mature mze-miR-135a-3p

• Accession: MIMAT0059957
• Description: Metriaclima zebra mze-miR-135a-3p mature miRNA
• Sequence: 39 - AUAUAGGGAUGGAAGCCAUGCA - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381