Stem-loop mze-mir-206

Accession

MI0034101

Description

Metriaclima zebra mze-mir-206 precursor miRNA

Sequence

1370135 reads, 45762.0 reads per million, 7 experiments

ACAUGCUUCCUUAUAUCCCCAUAuuaauacgccacuuaUGGAAUGUAAGGAAGUGUGUGG
((((((((((((((((..(((((.............))))).))))))))))))))))..

Structure

--                CC     uuaau 
  ACAUGCUUCCUUAUAU  CCAUA     a
  ||||||||||||||||  |||||     c
  UGUGUGAAGGAAUGUA  GGUau     g
GG                -A     ucacc 

Annotation confidence High

Genome context

AGTA03000110.1: 2479163-2479222 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from mze-mir-206

Mature mze-miR-206-5p

• Accession: MIMAT0059968
• Description: Metriaclima zebra mze-miR-206-5p mature miRNA
• Sequence: 1 - ACAUGCUUCCUUAUAUCCCCAUA - 23
• Evidence: experimental ; Illumina [1]

Mature mze-miR-206-3p

• Accession: MIMAT0042332
• Description: Metriaclima zebra mze-miR-206-3p mature miRNA
• Sequence: 39 - UGGAAUGUAAGGAAGUGUGUGG - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381