Stem-loop mze-mir-30d

Accession

MI0034110

Description

Metriaclima zebra mze-mir-30d precursor miRNA

Sequence

27814 reads, 1083.0 reads per million, 7 experiments

UGUAAACAUCCUACACUCAGCUguuauugauugccacagaggCUGAGAGGAGGUUGUUUACUUG
.(((((((.(((...(((((((.....((.....))....)))))))...))).)))))))...

Structure

--U       U   ACA       guuau  a 
   GUAAACA CCU   CUCAGCU     ug u
   ||||||| |||   |||||||     || u
   CAUUUGU GGA   GAGUCgg     ac g
GUU       U   GGA       -agac  c 

Annotation confidence High

Genome context

AGTA03000480.1: 189733-189796 [-]

Mature mze-miR-30d-5p

• Accession: MIMAT0042339
• Description: Metriaclima zebra mze-miR-30d-5p mature miRNA
• Sequence: 1 - UGUAAACAUCCUACACUCAGCU - 22
• Evidence: experimental ; Illumina [1]

Mature mze-miR-30d-3p

• Accession: MIMAT0059976
• Description: Metriaclima zebra mze-miR-30d-3p mature miRNA
• Sequence: 43 - CUGAGAGGAGGUUGUUUACUUG - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381