Stem-loop mze-mir-122

Accession

MI0034121

Description

Metriaclima zebra mze-mir-122 precursor miRNA

Sequence

500848 reads, 16241.0 reads per million, 7 experiments

UGGAGUGUGACAAUGGUGUUUGuuuccucuucgucaAACGCCAUUAUCACACUAAAU
...(((((((.(((((((((((............))))))))))).)))))))....

Structure

-UGG       C           uuucc 
    AGUGUGA AAUGGUGUUUG     u
    ||||||| |||||||||||      
    UCACACU UUACCGCAAac     c
UAAA       A           ugcuu 

Annotation confidence High

Genome context

AGTA03000045.1: 1349273-1349329 [+]

Mature mze-miR-122-5p

• Accession: MIMAT0042349
• Description: Metriaclima zebra mze-miR-122-5p mature miRNA
• Sequence: 1 - UGGAGUGUGACAAUGGUGUUUG - 22
• Evidence: experimental ; Illumina [1]

Mature mze-miR-122-3p

• Accession: MIMAT0059984
• Description: Metriaclima zebra mze-miR-122-3p mature miRNA
• Sequence: 37 - AACGCCAUUAUCACACUAAAU - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381