Stem-loop mze-mir-129-4

Accession

MI0034140

Description

Metriaclima zebra mze-mir-129-4 precursor miRNA

Sequence

61053 reads, 2033.0 reads per million, 7 experiments

CUUUUUGCGGUCUGGGCUUGCuguuccuaaggcaguagccaggAAGCCCUUACCCCAAAAAGuau
(((((((.(((..((((((.(((...(((......))).))).))))))..))).)))))))...

Structure

---       C   CU      G   uuc   ag 
   CUUUUUG GGU  GGGCUU Cug   cua  g
   ||||||| |||  |||||| |||   |||   
   GAAAAAC CCA  CCCGAA gac   gau  c
uau       C   UU      g   --c   ga 

Annotation confidence High

Genome context

AGTA03000088.1: 141797-141861 [+]

Mature mze-miR-129-5p

• Accession: MIMAT0042361
• Description: Metriaclima zebra mze-miR-129-5p mature miRNA
• Sequence: 1 - CUUUUUGCGGUCUGGGCUUGC - 21
• Evidence: experimental ; Illumina [1]

Mature mze-miR-129-4-3p

• Accession: MIMAT0059997
• Description: Metriaclima zebra mze-miR-129-4-3p mature miRNA
• Sequence: 44 - AAGCCCUUACCCCAAAAAG - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381