Stem-loop mze-mir-7a-1

Accession

MI0034157

Description

Metriaclima zebra mze-mir-7a-1 precursor miRNA

Sequence

103079 reads, 3211.0 reads per million, 7 experiments

UGGAAGACUAGUGAUUUUGUUGUUguaaauucauguuuuugacAACAGAGUCACAGUCUACCUC
.((.(((((.(((((((((((((((.((((....)))).)))))))))))))))))))).))..

Structure

-U  A     A               u    u 
  GG AGACU GUGAUUUUGUUGUUg aaau c
  || ||||| ||||||||||||||| ||||  
  CC UCUGA CACUGAGACAAcagu uuug a
CU  A     -               u    u 

Annotation confidence Not enough data

Genome context

AGTA03000239.1: 369682-369745 [+]

Mature mze-miR-7a-5p

• Accession: MIMAT0042370
• Description: Metriaclima zebra mze-miR-7a-5p mature miRNA
• Sequence: 1 - UGGAAGACUAGUGAUUUUGUUGUU - 24
• Evidence: experimental ; Illumina [1]

Mature mze-miR-7a-1-3p

• Accession: MIMAT0060009
• Description: Metriaclima zebra mze-miR-7a-1-3p mature miRNA
• Sequence: 44 - AACAGAGUCACAGUCUACCUC - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381