Stem-loop mze-mir-7b

Accession

MI0034161

Description

Metriaclima zebra mze-mir-7b precursor miRNA

Sequence

71826 reads, 2227.0 reads per million, 7 experiments

UGGAAGACUAGUGAUUUUGUUGUgacgcugaucaaagaaCAACAAGUCCCAGUCUGCCUCU
.((.(((((.(.(((((.(((((...............))))))))))).))))).))...

Structure

--U  A     A U     U     gacgcu 
   GG AGACU G GAUUU GUUGU      g
   || ||||| | ||||| |||||      a
   CC UCUGA C CUGAA CAACa      u
UCU  G     C -     -     agaaac 

Annotation confidence High

Genome context

AGTA03000035.1: 2132359-2132419 [+]

Mature mze-miR-7b-5p

• Accession: MIMAT0042377
• Description: Metriaclima zebra mze-miR-7b-5p mature miRNA
• Sequence: 1 - UGGAAGACUAGUGAUUUUGUUGU - 23
• Evidence: experimental ; Illumina [1]

Mature mze-miR-7b-3p

• Accession: MIMAT0060013
• Description: Metriaclima zebra mze-miR-7b-3p mature miRNA
• Sequence: 40 - CAACAAGUCCCAGUCUGCCUCU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381