Stem-loop mze-mir-33b

Accession

MI0034172

Description

Metriaclima zebra mze-mir-33b precursor miRNA

Sequence

914 reads, 37.0 reads per million, 7 experiments

gugcaUUGUAGUUGCAUUGCAUGugugucucagcugagugCAAUGUACCUGCAGUGCAACA
.((((((((((.((((((((((..((......))...)))))))))).))))))))))...

Structure

--g          U          -Gu  gu 
   ugcaUUGUAG UGCAUUGCAU   gu  c
   |||||||||| ||||||||||   ||   
   ACGUGACGUC AUGUAACgug   cg  u
ACA          C          agu  ac 

Annotation confidence Medium

Genome context

AGTA03000104.1: 1326505-1326565 [+]

Mature mze-miR-33b-5p

• Accession: MIMAT0060022
• Description: Metriaclima zebra mze-miR-33b-5p mature miRNA
• Sequence: 6 - UUGUAGUUGCAUUGCAUG - 23
• Evidence: experimental ; Illumina [1]

Mature mze-miR-33b-3p

• Accession: MIMAT0042387
• Description: Metriaclima zebra mze-miR-33b-3p mature miRNA
• Sequence: 41 - CAAUGUACCUGCAGUGCAACA - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381