Stem-loop mze-mir-22b

Accession

MI0034183

Description

Metriaclima zebra mze-mir-22b precursor miRNA

Sequence

239700 reads, 8797.0 reads per million, 7 experiments

AGUUCUUCACUGGCAAGCUUUAuguuucuguacacaugcuaAAGCUGCCAGCUGAAGAACU
(((((((((((((((.((((((.((............)))))))))))))).)))))))))

Structure

         -      A      u  uucug 
AGUUCUUCA CUGGCA GCUUUA gu     u
||||||||| |||||| |||||| ||      
UCAAGAAGU GACCGU CGAAau cg     a
         C      -      -  uacac 

Annotation confidence High

Genome context

AGTA03000075.1: 1472439-1472499 [+]

Mature mze-miR-22b-5p

• Accession: MIMAT0060028
• Description: Metriaclima zebra mze-miR-22b-5p mature miRNA
• Sequence: 1 - AGUUCUUCACUGGCAAGCUUUA - 22
• Evidence: experimental ; Illumina [1]

Mature mze-miR-22b-3p

• Accession: MIMAT0042395
• Description: Metriaclima zebra mze-miR-22b-3p mature miRNA
• Sequence: 42 - AAGCUGCCAGCUGAAGAACU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381