Stem-loop mze-mir-23a-2

Accession

MI0034185

Description

Metriaclima zebra mze-mir-23a-2 precursor miRNA

Sequence

7573 reads, 317.0 reads per million, 7 experiments

gguUCCUGGCACCGUGAUUUGAUGCAcaaagagaaacaaaaAUCACAUUGCCAGGGAUUUCCA
.((((((((((..(((((((...................)))))))..)))))))))).....

Structure

----g          CC       GAUGCAca 
     guUCCUGGCA  GUGAUUU        a
     ||||||||||  |||||||        a
     UAGGGACCGU  CACUAaa        g
ACCUU          UA       aacaaaga 

Annotation confidence Not enough data

Genome context

AGTA03000280.1: 168241-168303 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from mze-mir-23a-2

Mature mze-miR-23a-2-5p

• Accession: MIMAT0060030
• Description: Metriaclima zebra mze-miR-23a-2-5p mature miRNA
• Sequence: 4 - UCCUGGCACCGUGAUUUGAUGCA - 26
• Evidence: experimental ; Illumina [1]

Mature mze-miR-23a-3p

• Accession: MIMAT0042396
• Description: Metriaclima zebra mze-miR-23a-3p mature miRNA
• Sequence: 42 - AUCACAUUGCCAGGGAUUUCCA - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381