Stem-loop mze-mir-204-3

Accession

MI0034194

Description

Metriaclima zebra mze-mir-204-3 precursor miRNA

Sequence

116232 reads, 5032.0 reads per million, 7 experiments

UUCCCUUUGUCAUCCUAUGCCUggauuaauacaaaaggGGCUGGGAAGGCAAAGGGACGGc
.((((((((((.(((((.((((...............))))))))).))))))))))....

Structure

---U          A     U    ggauua 
    UCCCUUUGUC UCCUA GCCU      a
    |||||||||| ||||| ||||      u
    AGGGAAACGG AGGGU CGGg      a
cGGC          A     -    gaaaac 

Annotation confidence High

Genome context

AGTA03000050.1: 5595489-5595549 [-]

Mature mze-miR-204-5p

• Accession: MIMAT0042290
• Description: Metriaclima zebra mze-miR-204-5p mature miRNA
• Sequence: 1 - UUCCCUUUGUCAUCCUAUGCCU - 22
• Evidence: experimental ; Illumina [1]

Mature mze-miR-204-3-3p

• Accession: MIMAT0059914
• Description: Metriaclima zebra mze-miR-204-3-3p mature miRNA
• Sequence: 39 - GGCUGGGAAGGCAAAGGGACGG - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381