Stem-loop mze-mir-124-1

Accession

MI0034195

Description

Metriaclima zebra mze-mir-124-1 precursor miRNA

Sequence

4268 reads, 318.0 reads per million, 7 experiments

CGUGUUCACGGCGGACCUUGAUUuauuagccauacaauUAAGGCACGCGGUGAAUGCC
.((((((((.(((..(((((((((((.....))).))))))))..))).)))))))).

Structure

C        G   GA        -   u 
 GUGUUCAC GCG  CCUUGAUU uau a
 |||||||| |||  |||||||| ||| g
 CGUAAGUG CGC  GGAAUuaa aua c
C        G   AC        c   c 

Annotation confidence High

Genome context

AGTA03000038.1: 8297181-8297238 [-]

Mature mze-miR-124-1-5p

• Accession: MIMAT0060033
• Description: Metriaclima zebra mze-miR-124-1-5p mature miRNA
• Sequence: 1 - CGUGUUCACGGCGGACCUUGAUU - 23
• Evidence: experimental ; Illumina [1]

Mature mze-miR-124-3p

• Accession: MIMAT0042399
• Description: Metriaclima zebra mze-miR-124-3p mature miRNA
• Sequence: 39 - UAAGGCACGCGGUGAAUGCC - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381