Stem-loop mze-mir-124-5

Accession

MI0034202

Description

Metriaclima zebra mze-mir-124-5 precursor miRNA

Sequence

10003 reads, 522.0 reads per million, 7 experiments

CGUGUUCACAGCGGACCUUGAUUuaauguccauacaauUAAGGCACGCGGUGAAUGCC
.((((((((.(((..((((((((............))))))))..))).)))))))).

Structure

C        A   GA        uaaug 
 GUGUUCAC GCG  CCUUGAUU     u
 |||||||| |||  ||||||||      
 CGUAAGUG CGC  GGAAUuaa     c
C        G   AC        cauac 

Annotation confidence High

Genome context

AGTA03000038.1: 2925353-2925410 [-]

Mature mze-miR-124-5p

• Accession: MIMAT0060032
• Description: Metriaclima zebra mze-miR-124-5p mature miRNA
• Sequence: 1 - CGUGUUCACAGCGGACCUUGAUU - 23
• Evidence: experimental ; Illumina [1]

Mature mze-miR-124-3p

• Accession: MIMAT0042399
• Description: Metriaclima zebra mze-miR-124-3p mature miRNA
• Sequence: 39 - UAAGGCACGCGGUGAAUGCC - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381