Stem-loop mze-mir-132b

Accession

MI0034209

Description

Metriaclima zebra mze-mir-132b precursor miRNA

Sequence

3244 reads, 167.0 reads per million, 7 experiments

ACCGUGGCUUUAGAUUGUUACUcuagcaacagcaccauggUAACAGUCUACAGCCAUGGUC
(((((((((.((((((((((((...((....)).....)))))))))))).))))))))).

Structure

-         U            --cua  a 
 ACCGUGGCU UAGAUUGUUACU     gc a
 ||||||||| ||||||||||||     ||  
 UGGUACCGA AUCUGACAAUgg     cg c
C         C            uacca  a 

Annotation confidence High

Genome context

AGTA03000075.1: 717341-717401 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mze-mir-132b

Mature mze-miR-132b-5p

• Accession: MIMAT0042405
• Description: Metriaclima zebra mze-miR-132b-5p mature miRNA
• Sequence: 1 - ACCGUGGCUUUAGAUUGUUACU - 22
• Evidence: experimental ; Illumina [1]

Mature mze-miR-132b-3p

• Accession: MIMAT0060037
• Description: Metriaclima zebra mze-miR-132b-3p mature miRNA
• Sequence: 41 - UAACAGUCUACAGCCAUGGUC - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381