Stem-loop mze-mir-135d

Accession

MI0034223

Description

Metriaclima zebra mze-mir-135d precursor miRNA

Sequence

5187 reads, 261.0 reads per million, 7 experiments

UAUGGCUUUUUAUUCCUACGUGAugguagauggguucAUGUAGGAGUAGAAGCCACU
..((((((((.((((((((((((............))))))))))))))))))))..

Structure

UA        U            uggua 
  UGGCUUUU AUUCCUACGUGA     g
  |||||||| ||||||||||||      
  ACCGAAGA UGAGGAUGUAcu     a
UC        -            ugggu 

Annotation confidence High

Genome context

AGTA03000163.1: 3238374-3238430 [-]

Mature mze-miR-135d-5p

• Accession: MIMAT0042417
• Description: Metriaclima zebra mze-miR-135d-5p mature miRNA
• Sequence: 1 - UAUGGCUUUUUAUUCCUACGUGA - 23
• Evidence: experimental ; Illumina [1]

Mature mze-miR-135d-3p

• Accession: MIMAT0060048
• Description: Metriaclima zebra mze-miR-135d-3p mature miRNA
• Sequence: 38 - AUGUAGGAGUAGAAGCCACU - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381