Stem-loop mze-mir-31

Accession

MI0034224

Description

Metriaclima zebra mze-mir-31 precursor miRNA

Sequence

1630 reads, 59.0 reads per million, 7 experiments

AGGCAAGAUGUUGGCAUAGCUGuugaguugaaaacccUGCUAUGCCGACAAAUUGCCAUC
.(((((..((((((((((((.(((........)))...))))))))))))..)))))...

Structure

--A     GA            --U   gag 
   GGCAA  UGUUGGCAUAGC   Guu   u
   |||||  ||||||||||||   |||    
   CCGUU  ACAGCCGUAUCG   caa   u
CUA     AA            Ucc   aag 

Annotation confidence High

Genome context

AGTA03000160.1: 442250-442309 [+]

Mature mze-miR-31-5p

• Accession: MIMAT0042418
• Description: Metriaclima zebra mze-miR-31-5p mature miRNA
• Sequence: 1 - AGGCAAGAUGUUGGCAUAGCUG - 22
• Evidence: experimental ; Illumina [1]

Mature mze-miR-31-3p

• Accession: MIMAT0060049
• Description: Metriaclima zebra mze-miR-31-3p mature miRNA
• Sequence: 38 - UGCUAUGCCGACAAAUUGCCAUC - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381