miRBase entry: mze-mir-301a

Stem-loop mze-mir-301a


Accession
MI0034233
Description
Metriaclima zebra mze-mir-301a precursor miRNA


Sequence

791 reads, 75.0 reads per million, 7 experiments
gcUCUGACUUCAUUGCACUACUGUAucagacaacuagUAGUGCAAUAGUAUUGUCAAAGC
(((.((((..((((((((((((((........)).))))))))))).)....)))).)))

Structure
   C    --UU -           -  Auc 
gcU UGAC    C AUUGCACUACU GU   a
||| ||||    | ||||||||||| ||    
CGA ACUG    G UAACGUGAUga ca   g
   A    UUAU A           u  aca 


Annotation confidence High
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Genome context
AGTA03000357.1: 535853-535912 [+]

Database links

Mature mze-miR-301a-5p

Accession MIMAT0060055
Description Metriaclima zebra mze-miR-301a-5p mature miRNA
Sequence 3 - UCUGACUUCAUUGCACUACUGUA - 25
Evidence experimental
Illumina [1]

Mature mze-miR-301a-3p

Accession MIMAT0042427
Description Metriaclima zebra mze-miR-301a-3p mature miRNA
Sequence 38 - UAGUGCAAUAGUAUUGUCAAAGC - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381