Stem-loop mze-mir-181a

Accession

MI0034234

Description

Metriaclima zebra mze-mir-181a precursor miRNA

Sequence

22805 reads, 1886.0 reads per million, 7 experiments

CACAUUCAUCGCUGUCGGUGGGuuaguaaugccauaaacucgccaggcgaugaaugacaa
..(((((((((((...((((((((.((......)).)))))))).)))))))))))....

Structure

--CA           GUC        a  aa 
    CAUUCAUCGCU   GGUGGGuu gu  u
    |||||||||||   |||||||| ||   
    guaaguagcgg   ccgcucaa ua  g
aaca           --a        a  cc 

Annotation confidence Not enough data

Genome context

AGTA03000177.1: 1061781-1061840 [+]

Mature mze-miR-181a-5p

• Accession: MIMAT0042428
• Description: Metriaclima zebra mze-miR-181a-5p mature miRNA
• Sequence: 1 - CACAUUCAUCGCUGUCGGUGGG - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381