Stem-loop mze-mir-125c

Accession

MI0034238

Description

Metriaclima zebra mze-mir-125c precursor miRNA

Sequence

ucccugagacccuaacuugugacguugugcuuucauguccACGGGUUAGGCUCUCGGGAGCU
..(((((((.(((((((((((((((.(......))))).))))))))))).)))))))....

Structure

--uc       c           -    u ug 
    ccugaga ccuaacuugug acgu g  c
    ||||||| ||||||||||| |||| |   
    GGGCUCU GGAUUGGGCAc ugua c  u
UCGA       C           c    - uu 

Annotation confidence Not enough data

Genome context

AGTA03000072.1: 2135822-2135883 [+]

Clustered miRNAs

3 other miRNAs are < 10 kb from mze-mir-125c

Mature mze-miR-125c

• Accession: MIMAT0042432
• Description: Metriaclima zebra mze-miR-125c mature miRNA
• Sequence: 41 - ACGGGUUAGGCUCUCGGGAGCU - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381