Stem-loop mze-mir-219b

Accession

MI0034241

Description

Metriaclima zebra mze-mir-219b precursor miRNA

Sequence

2980 reads, 104.0 reads per million, 7 experiments

UGAUUGUCCAAACGCAAUUCUUGAGuaaacucauauucaaccccaAGAAUUGUGUAUGGACAUCUGU
.(((.(((((.((((((((((((....................)))))))))))).))))))))...

Structure

--U   U     A            AGuaaacuc 
   GAU GUCCA ACGCAAUUCUUG         a
   ||| ||||| ||||||||||||          
   CUA CAGGU UGUGUUAAGAac         u
UGU   -     A            cccaacuua 

Annotation confidence High

Genome context

AGTA03000002.1: 4717306-4717372 [-]

Mature mze-miR-219b-5p

• Accession: MIMAT0060061
• Description: Metriaclima zebra mze-miR-219b-5p mature miRNA
• Sequence: 1 - UGAUUGUCCAAACGCAAUUCUUGAG - 25
• Evidence: experimental ; Illumina [1]

Mature mze-miR-219b-3p

• Accession: MIMAT0042435
• Description: Metriaclima zebra mze-miR-219b-3p mature miRNA
• Sequence: 46 - AGAAUUGUGUAUGGACAUCUGU - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381