Stem-loop mze-mir-148

Accession

MI0034245

Description

Metriaclima zebra mze-mir-148 precursor miRNA

Sequence

13864 reads, 794.0 reads per million, 7 experiments

AAGUUCUGUGAUACACUUAGACUcuaacugcccgcagUCAGUGCAUUACAGAACUUUG
((((((((((((.((((..(((((.........).)))))))).))))))))))))..

Structure

--            A    UA    - uaa 
  AAGUUCUGUGAU CACU  GACU c   c
  |||||||||||| ||||  |||| |   u
  UUCAAGACAUUA GUGA  CUga g   g
GU            C    --    c ccc 

Annotation confidence High

Genome context

AGTA03000134.1: 2098542-2098599 [-]

Mature mze-miR-148-5p

• Accession: MIMAT0042440
• Description: Metriaclima zebra mze-miR-148-5p mature miRNA
• Sequence: 1 - AAGUUCUGUGAUACACUUAGACU - 23
• Evidence: experimental ; Illumina [1]

Mature mze-miR-148-3p

• Accession: MIMAT0060063
• Description: Metriaclima zebra mze-miR-148-3p mature miRNA
• Sequence: 38 - UCAGUGCAUUACAGAACUUUG - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381