Stem-loop mze-mir-8159

Accession

MI0034253

Description

Metriaclima zebra mze-mir-8159 precursor miRNA

Sequence

18769 reads, 833.0 reads per million, 7 experiments

UCAGUAACUGGAAUCUGUCCCUGCgugguaaaagugugcAGGGCCUGGCUGGUUACUGCAC
.((((((((((.....(.(((((((...........))))))).)...))))))))))...

Structure

--U          AAUCU U       uggu 
   CAGUAACUGG     G CCCUGCg    a
   ||||||||||     | |||||||    a
   GUCAUUGGUC     C GGGAcgu    a
CAC          --GGU C       guga 

Annotation confidence High

Genome context

AGTA03000206.1: 1592039-1592099 [-]

Mature mze-miR-8159-5p

• Accession: MIMAT0042449
• Description: Metriaclima zebra mze-miR-8159-5p mature miRNA
• Sequence: 1 - UCAGUAACUGGAAUCUGUCCCUGC - 24
• Evidence: experimental ; Illumina [1]

Mature mze-miR-8159-3p

• Accession: MIMAT0060067
• Description: Metriaclima zebra mze-miR-8159-3p mature miRNA
• Sequence: 40 - AGGGCCUGGCUGGUUACUGCAC - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381