Stem-loop mze-mir-10566

Accession

MI0034255

Description

Metriaclima zebra mze-mir-10566 precursor miRNA

Sequence

21037 reads, 676.0 reads per million, 7 experiments

GAGCCAGACCGCAGCCGGAGCAucacccauggagcacgacgCUCCGGCUGCGGUCCGACUCGC
(((.(.(((((((((((((((.((.............)).))))))))))))))).).)))..

Structure

--   C A               A  accca 
  GAG C GACCGCAGCCGGAGC uc     u
  ||| | ||||||||||||||| ||     g
  CUC G CUGGCGUCGGCCUCg ag     g
CG   A C               c  cacga 

Annotation confidence High

Genome context

AGTA03000223.1: 386781-386843 [-]

Mature mze-miR-10566-5p

• Accession: MIMAT0060068
• Description: Metriaclima zebra mze-miR-10566-5p mature miRNA
• Sequence: 1 - GAGCCAGACCGCAGCCGGAGCA - 22
• Evidence: experimental ; Illumina [1]

Mature mze-miR-10566-3p

• Accession: MIMAT0042451
• Description: Metriaclima zebra mze-miR-10566-3p mature miRNA
• Sequence: 42 - CUCCGGCUGCGGUCCGACUCGC - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381