Stem-loop nbr-mir-10568

Accession

MI0034267

Description

Neolamprologus brichardi nbr-mir-10568 precursor miRNA

Sequence

7317 reads, 436.0 reads per million, 7 experiments

UGUCCGGCAGAUGGGAACAUCUCUCucuuucuaaauuuugaCAGAUUUCACACUUGCCACAUC
.....(((((.((.(((.((((.((..............)).))))))).)).))))).....

Structure

UGUCC     A  G   C    C  ucuuuc 
     GGCAG UG GAA AUCU UC      u
     ||||| || ||| |||| ||       
     CCGUU AC CUU UAGA ag      a
CUACA     C  A   -    C  uuuuaa 

Annotation confidence High

Genome context

JH422273.1: 16130280-16130342 [+]

Mature nbr-miR-10568-5p

• Accession: MIMAT0042460
• Description: Neolamprologus brichardi nbr-miR-10568-5p mature miRNA
• Sequence: 1 - UGUCCGGCAGAUGGGAACAUCUCUC - 25
• Evidence: experimental ; Illumina [1]

Mature nbr-miR-10568-3p

• Accession: MIMAT0060074
• Description: Neolamprologus brichardi nbr-miR-10568-3p mature miRNA
• Sequence: 42 - CAGAUUUCACACUUGCCACAUC - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381