Stem-loop nbr-mir-10b

Accession

MI0034274

Description

Neolamprologus brichardi nbr-mir-10b precursor miRNA

Sequence

1216156 reads, 69516.0 reads per million, 7 experiments

UACCCUGUAGAACCGAAUGUGUguggagcugccucagucaCAGAUUGGGUUCUUGGGGAGUc
..(((((.((((((.(((.((((..(((....)))...)))).))).)))))))))))....

Structure

--UA     U      G   G    -ug   c 
    CCCUG AGAACC AAU UGUg   gag u
    ||||| |||||| ||| ||||   |||  
    GGGGU UCUUGG UUA ACac   cuc g
cUGA     -      G   G    uga   c 

Annotation confidence High

Genome context

JH422278.1: 4882933-4882994 [+]

Mature nbr-miR-10b-5p

• Accession: MIMAT0042466
• Description: Neolamprologus brichardi nbr-miR-10b-5p mature miRNA
• Sequence: 1 - UACCCUGUAGAACCGAAUGUGU - 22
• Evidence: experimental ; Illumina [1]

Mature nbr-miR-10b-3p

• Accession: MIMAT0060078
• Description: Neolamprologus brichardi nbr-miR-10b-3p mature miRNA
• Sequence: 41 - CAGAUUGGGUUCUUGGGGAGU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381