Stem-loop nbr-mir-9-3

Accession

MI0034285

Description

Neolamprologus brichardi nbr-mir-9-3 precursor miRNA

Sequence

1774755 reads, 90389.0 reads per million, 7 experiments

UCUUUGGUUAUCUAGCUGUAUGagugauguacauucuucAUAAAGCUAGAUAACCGAAAGu
..(((((((((((((((.((((((.((.......)))))))).)))))))))))))))...

Structure

-UC               G      u  ug 
   UUUGGUUAUCUAGCU UAUGag ga  u
   ||||||||||||||| |||||| ||  a
   AAGCCAAUAGAUCGA AUAcuu cu  c
uGA               A      -  ua 

Annotation confidence High

Genome context

JH422294.1: 3825492-3825552 [-]

Mature nbr-miR-9-5p

• Accession: MIMAT0042470
• Description: Neolamprologus brichardi nbr-miR-9-5p mature miRNA
• Sequence: 1 - UCUUUGGUUAUCUAGCUGUAUG - 22
• Evidence: experimental ; Illumina [1]

Mature nbr-miR-9-3p

• Accession: MIMAT0060084
• Description: Neolamprologus brichardi nbr-miR-9-3p mature miRNA
• Sequence: 40 - AUAAAGCUAGAUAACCGAAAG - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381