Stem-loop nbr-mir-9-6

Accession

MI0034288

Description

Neolamprologus brichardi nbr-mir-9-6 precursor miRNA

Sequence

1774728 reads, 90388.0 reads per million, 7 experiments

UCUUUGGUUAUCUAGCUGUAUGaguguuaaauaccugucAUAAAGCUAGAUAACCGAAAGu
..(((((((((((((((.(((((((((...))))...))))).)))))))))))))))...

Structure

-UC               G     ---    u 
   UUUGGUUAUCUAGCU UAUGa   gugu  
   ||||||||||||||| |||||   |||| a
   AAGCCAAUAGAUCGA AUAcu   caua  
uGA               A     guc    a 

Annotation confidence High

Genome context

JH422288.1: 7319234-7319294 [+]

Mature nbr-miR-9-5p

• Accession: MIMAT0042470
• Description: Neolamprologus brichardi nbr-miR-9-5p mature miRNA
• Sequence: 1 - UCUUUGGUUAUCUAGCUGUAUG - 22
• Evidence: experimental ; Illumina [1]

Mature nbr-miR-9-3p

• Accession: MIMAT0060084
• Description: Neolamprologus brichardi nbr-miR-9-3p mature miRNA
• Sequence: 40 - AUAAAGCUAGAUAACCGAAAG - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381