miRBase entry: nbr-mir-100-1

Accession

MI0034295

Description

Neolamprologus brichardi nbr-mir-100-1 precursor miRNA

Sequence

AACCCGUAGAUCCGAACUUGUGuuaagugacaccacaagcuuguaucuacaggucug
.(((.((((((.(((.((((((...........)))))).))).)))))).)))...

Structure

--A   C      C   A      uuaa 
   ACC GUAGAU CGA CUUGUG    g
   ||| |||||| ||| ||||||    u
   ugg caucua guu gaacac    g
guc   a      u   c      caca

Annotation confidence Not enough data

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Genome context

JH422335.1: 3458751-3458807 [+]

Clustered miRNAs

3 other miRNAs are < 10 kb from nbr-mir-100-1

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Accession	MIMAT0042475
Description	Neolamprologus brichardi nbr-miR-100 mature miRNA
Sequence	1 - AACCCGUAGAUCCGAACUUGUG - 22
Evidence	experimental Illumina [1]

PubMed ID: 25186727
The genomic substrate for adaptive radiation in African cichlid fish
"Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
"Nature (2014) 513:375-381