Stem-loop nbr-mir-184a

Accession

MI0034300

Description

Neolamprologus brichardi nbr-mir-184a precursor miRNA

Sequence

780165 reads, 42712.0 reads per million, 7 experiments

CCUUAUCACUUUUCCAGCCCAGCuauagauucuguauccguUGGACGGAGAACUGAUAAGGGC
((((((((.((((((.(.((((((((((...)))))...))))).))))))).))))))))..

Structure

--        C      A C     ---     a 
  CCUUAUCA UUUUCC G CCAGC   uauag  
  |||||||| |||||| | |||||   ||||| u
  GGAAUAGU AAGAGG C GGUug   auguc  
CG        C      - A     ccu     u 

Annotation confidence High

Genome context

JH422273.1: 9462570-9462632 [-]

Mature nbr-miR-184a-5p

• Accession: MIMAT0060099
• Description: Neolamprologus brichardi nbr-miR-184a-5p mature miRNA
• Sequence: 1 - CCUUAUCACUUUUCCAGCCCAGC - 23
• Evidence: experimental ; Illumina [1]

Mature nbr-miR-184a-3p

• Accession: MIMAT0042477
• Description: Neolamprologus brichardi nbr-miR-184a-3p mature miRNA
• Sequence: 42 - UGGACGGAGAACUGAUAAGGGC - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381