Stem-loop nbr-mir-203-1

Accession

MI0034304

Description

Neolamprologus brichardi nbr-mir-203-1 precursor miRNA

Sequence

45626 reads, 2540.0 reads per million, 7 experiments

AGUGGUUCUCAACAGUUCAACAguucuuuaacaaaauuGUGAAAUGUUUAGGACCACUUG
(((((((((.((((.((((.(((((.........))))))))).)))).)))))))))..

Structure

--         C    G    A     cuu 
  AGUGGUUCU AACA UUCA CAguu   u
  ||||||||| |||| |||| |||||   a
  UCACCAGGA UUGU AAGU Guuaa   a
GU         U    A    -     aac 

Annotation confidence High

Genome context

JH422282.1: 9906976-9907035 [+]

Mature nbr-miR-203-1-5p

• Accession: MIMAT0060103
• Description: Neolamprologus brichardi nbr-miR-203-1-5p mature miRNA
• Sequence: 1 - AGUGGUUCUCAACAGUUCAACA - 22
• Evidence: experimental ; Illumina [1]

Mature nbr-miR-203-3p

• Accession: MIMAT0042481
• Description: Neolamprologus brichardi nbr-miR-203-3p mature miRNA
• Sequence: 39 - GUGAAAUGUUUAGGACCACUUG - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381